1894 heterodimers in our 3d-library
The 3D-patrner uses IMPALA to identify the 3D-dimer templates of a query sequence. Here, the 3D-dimer template library, which consists of 1894 complexes (i.e. 3,788 sequences), was extracted from the Protein Data Bank (PDB) released in Feb 24, 2006.
563 test set
A non-redundant set was used to evaluate the performance of the 3D-partner server using various scoring methods for interacting partner predictions. This set consists of 563 dimer complexes from the 3D-dimer library according to their SCOP interacting-domain pairs.